Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOG68469.1 | KOG70480.1 | ADK78_36505 | ADK78_29055 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG68469.1 | KOG70736.1 | ADK78_36505 | ADK78_27395 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| KOG68469.1 | KOG70776.1 | ADK78_36505 | ADK78_27610 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.997 |
| KOG68469.1 | KOG71982.1 | ADK78_36505 | ADK78_23065 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG68469.1 | KOG72627.1 | ADK78_36505 | ADK78_19305 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| KOG68469.1 | KOG72631.1 | ADK78_36505 | ADK78_19325 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| KOG68469.1 | KOG80750.1 | ADK78_36505 | ADK78_04635 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG68469.1 | thrS | ADK78_36505 | ADK78_19310 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | threonine--tRNA ligase; Catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.857 |
| KOG70480.1 | KOG68469.1 | ADK78_29055 | ADK78_36505 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG70480.1 | KOG70736.1 | ADK78_29055 | ADK78_27395 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG70480.1 | KOG70776.1 | ADK78_29055 | ADK78_27610 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| KOG70480.1 | KOG71982.1 | ADK78_29055 | ADK78_23065 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| KOG70480.1 | KOG72627.1 | ADK78_29055 | ADK78_19305 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.688 |
| KOG70480.1 | KOG72631.1 | ADK78_29055 | ADK78_19325 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| KOG70480.1 | KOG80750.1 | ADK78_29055 | ADK78_04635 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.973 |
| KOG70480.1 | thrS | ADK78_29055 | ADK78_19310 | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | threonine--tRNA ligase; Catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.549 |
| KOG70736.1 | KOG68469.1 | ADK78_27395 | ADK78_36505 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| KOG70736.1 | KOG70480.1 | ADK78_27395 | ADK78_29055 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| KOG70736.1 | KOG70776.1 | ADK78_27395 | ADK78_27610 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.920 |
| KOG70736.1 | KOG71982.1 | ADK78_27395 | ADK78_23065 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
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