Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KOG69834.1 | KOG69835.1 | ADK78_31435 | ADK78_31445 | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.692 |
KOG69834.1 | KOG81162.1 | ADK78_31435 | ADK78_04345 | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
KOG69834.1 | proC | ADK78_31435 | ADK78_31430 | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.945 |
KOG69835.1 | KOG69834.1 | ADK78_31445 | ADK78_31435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.692 |
KOG69835.1 | KOG81162.1 | ADK78_31445 | ADK78_04345 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
KOG69835.1 | proC | ADK78_31445 | ADK78_31430 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.461 |
KOG81162.1 | KOG69834.1 | ADK78_04345 | ADK78_31435 | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.915 |
KOG81162.1 | KOG69835.1 | ADK78_04345 | ADK78_31445 | Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
proC | KOG69834.1 | ADK78_31430 | ADK78_31435 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Antibiotic ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.945 |
proC | KOG69835.1 | ADK78_31430 | ADK78_31445 | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |