STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ67066.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)    
Predicted Functional Partners:
AIQ67601.1
FkbH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.630
AIQ69048.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.613
AIQ69305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.578
AIQ67768.1
Tetracycline resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.558
AIQ67067.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.537
AIQ70353.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.528
AIQ67065.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
 
     0.519
AIQ67989.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
AIQ66518.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.480
AIQ67602.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.460
Your Current Organism:
Paenibacillus graminis
NCBI taxonomy Id: 189425
Other names: ATCC BAA-95, DSM 15220, LMG 19080, LMG:19080, P. graminis, Paenibacillus graminis Berge et al. 2002, Paenibacillus sp. RSA19, strain RSA19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.