node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIQ70597.1 | queA | PGRAT_25385 | PGRAT_25465 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.690 |
AIQ70597.1 | rny | PGRAT_25385 | PGRAT_18230 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. | 0.432 |
AIQ70597.1 | ruvA | PGRAT_25385 | PGRAT_25480 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.556 |
AIQ70597.1 | ruvB | PGRAT_25385 | PGRAT_25475 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.677 |
AIQ70597.1 | ruvC | PGRAT_25385 | PGRAT_25485 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.532 |
AIQ70597.1 | tgt | PGRAT_25385 | PGRAT_25460 | Single-stranded DNA exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.417 |
AIQ70610.1 | AIQ70613.1 | PGRAT_25455 | PGRAT_25470 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
AIQ70610.1 | AIQ70617.1 | PGRAT_25455 | PGRAT_25490 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.658 |
AIQ70610.1 | queA | PGRAT_25455 | PGRAT_25465 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.815 |
AIQ70610.1 | ruvA | PGRAT_25455 | PGRAT_25480 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.755 |
AIQ70610.1 | ruvB | PGRAT_25455 | PGRAT_25475 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.768 |
AIQ70610.1 | ruvC | PGRAT_25455 | PGRAT_25485 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.746 |
AIQ70610.1 | tgt | PGRAT_25455 | PGRAT_25460 | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.866 |
AIQ70613.1 | AIQ70610.1 | PGRAT_25470 | PGRAT_25455 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
AIQ70613.1 | AIQ70617.1 | PGRAT_25470 | PGRAT_25490 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.689 |
AIQ70613.1 | queA | PGRAT_25470 | PGRAT_25465 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). | 0.841 |
AIQ70613.1 | ruvA | PGRAT_25470 | PGRAT_25480 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.766 |
AIQ70613.1 | ruvB | PGRAT_25470 | PGRAT_25475 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.796 |
AIQ70613.1 | ruvC | PGRAT_25470 | PGRAT_25485 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.766 |
AIQ70613.1 | tgt | PGRAT_25470 | PGRAT_25460 | Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.819 |