STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ71641.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
AIQ67740.1
SpoVAD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.691
AIQ67284.1
Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.687
AIQ66767.1
Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.681
AIQ67995.1
Spore gernimation protein KA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.675
AIQ68032.1
Spore gernimation protein GerK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.670
AIQ69182.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.655
AIQ67741.1
Stage V sporulation protein AEB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.654
AIQ69893.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.651
AIQ68767.1
Spore gernimation protein GerA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.648
AIQ69862.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.641
Your Current Organism:
Paenibacillus graminis
NCBI taxonomy Id: 189425
Other names: ATCC BAA-95, DSM 15220, LMG 19080, LMG:19080, P. graminis, Paenibacillus graminis Berge et al. 2002, Paenibacillus sp. RSA19, strain RSA19
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.