STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ72033.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)    
Predicted Functional Partners:
AIQ72032.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
AIQ72542.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.768
AIQ72836.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.764
AIQ76771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
AIQ75303.1
5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
AIQ75542.1
Sugar ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.714
AIQ73502.1
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.699
AIQ76455.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.687
AIQ73009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.682
AIQ75543.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.