STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ72044.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
AIQ71993.1
2', 3'-cyclic nucleotide 2'-phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.910
AIQ73354.1
5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.
   
 
 0.905
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.901
AIQ72378.1
Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
  0.900
AIQ73539.1
Deoxycytidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
 
  0.900
AIQ72047.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.826
AIQ72045.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.674
AIQ72046.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.646
AIQ72048.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.599
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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