STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ72579.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
AIQ72577.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.934
AIQ74961.1
Beta-xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.911
AIQ74108.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.886
AIQ74899.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.873
AIQ75263.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.873
AIQ77120.1
Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.873
AIQ72575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
AIQ72574.1
Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.841
htpG
Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
  
 0.818
AIQ71876.1
Inosine-5-monophosphate dehydrogenase; Catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IMPDH/GMPR family.
  
 0.809
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.