STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ73694.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (955 aa)    
Predicted Functional Partners:
AIQ74464.1
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
  
     0.763
AIQ76437.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.748
AIQ73809.1
Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.733
AIQ76436.1
Alpha-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 67 family.
  
     0.714
AIQ74480.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.711
AIQ74000.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.684
AIQ76438.1
Xylosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
  
     0.684
AIQ73458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.674
AIQ73693.1
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.667
AIQ73887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.667
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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