STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ76671.1Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
AIQ76670.1
KinB signaling pathway activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
AIQ72751.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
AIQ74830.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
AIQ75957.1
precorrin-3B C17-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
AIQ73688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
AIQ71842.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
AIQ72339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.769
AIQ74703.1
Spore gernimation protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.766
AIQ76406.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
AIQ76169.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.749
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.