STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ76852.1Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)    
Predicted Functional Partners:
AIQ76850.1
Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
AIQ76851.1
Flagellar synthesis anti-sigma-D factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
AIQ76849.1
Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
AIQ76848.1
Flagellar hook protein FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.913
AIQ71956.1
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
   
 0.909
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.894
AIQ74337.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.894
AIQ76847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.890
AIQ76833.1
Flagellar capping protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.860
AIQ76834.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.860
Your Current Organism:
Paenibacillus odorifer
NCBI taxonomy Id: 189426
Other names: ATCC BAA-93, DSM 15391, JCM 21743, LMG 19079, LMG:19079, P. odorifer, Paenibacillus odorifer Berge et al. 2002, Paenibacillus sp. TOD45, strain TOD45
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