STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922955_00177Unannotated protein. (144 aa)    
Predicted Functional Partners:
GCA_001922955_00176
Unannotated protein.
 
  
 0.881
GCA_001922955_00178
Unannotated protein.
       0.798
GCA_001922955_01330
Unannotated protein.
    
 0.704
GCA_001922955_01081
Unannotated protein.
  
  
 0.664
GCA_001922955_01752
Unannotated protein.
  
  
 0.660
GCA_001922955_01652
Unannotated protein.
  
 
 
 0.593
GCA_001922955_04040
Unannotated protein.
    
 0.532
GCA_001922955_03664
Unannotated protein.
  
 
 
 0.525
GCA_001922955_01080
Unannotated protein.
  
  
 0.518
GCA_001922955_00398
Unannotated protein.
  
     0.497
Your Current Organism:
Alteromonadales bacterium BS08
NCBI taxonomy Id: 1895005
Other names: A. bacterium BS08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.