STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922955_00858Unannotated protein. (465 aa)    
Predicted Functional Partners:
GCA_001922955_00416
Unannotated protein.
 0.987
GCA_001922955_03024
Unannotated protein.
 0.982
GCA_001922955_02597
Unannotated protein.
  
 0.970
GCA_001922955_00417
Unannotated protein.
  
 0.953
GCA_001922955_00868
Unannotated protein.
  
 
 0.902
GCA_001922955_01330
Unannotated protein.
  
 0.898
GCA_001922955_01028
Unannotated protein.
 
  
 0.896
GCA_001922955_03752
Unannotated protein.
   
 0.893
GCA_001922955_00414
Unannotated protein.
  
 0.887
GCA_001922955_03025
Unannotated protein.
  
 
 0.879
Your Current Organism:
Alteromonadales bacterium BS08
NCBI taxonomy Id: 1895005
Other names: A. bacterium BS08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.