STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922955_03560Unannotated protein. (304 aa)    
Predicted Functional Partners:
GCA_001922955_04040
Unannotated protein.
   
 0.886
GCA_001922955_00465
Unannotated protein.
  
  
  0.838
GCA_001922955_01919
Unannotated protein.
   
 0.803
GCA_001922955_01120
Unannotated protein.
   
 0.787
GCA_001922955_01330
Unannotated protein.
   
 0.708
GCA_001922955_02432
Unannotated protein.
     
 0.690
GCA_001922955_02439
Unannotated protein.
    
 0.689
GCA_001922955_01112
Unannotated protein.
   
 0.650
GCA_001922955_03936
Unannotated protein.
   
 0.650
GCA_001922955_01311
Unannotated protein.
  
  
  0.633
Your Current Organism:
Alteromonadales bacterium BS08
NCBI taxonomy Id: 1895005
Other names: A. bacterium BS08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.