STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001922955_03928Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_001922955_03927
Unannotated protein.
       0.781
GCA_001922955_03929
Unannotated protein.
       0.773
GCA_001922955_03845
Unannotated protein.
  
     0.745
GCA_001922955_01555
Unannotated protein.
    
  0.694
GCA_001922955_03102
Unannotated protein.
  
     0.693
GCA_001922955_01554
Unannotated protein.
    
  0.688
GCA_001922955_01870
Unannotated protein.
  
     0.647
GCA_001922955_00740
Unannotated protein.
  
     0.639
GCA_001922955_03726
Unannotated protein.
  
  
  0.581
GCA_001922955_03926
Unannotated protein.
       0.555
Your Current Organism:
Alteromonadales bacterium BS08
NCBI taxonomy Id: 1895005
Other names: A. bacterium BS08
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.