Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_0067 | LA_0068 | LA_0067 | LA_0068 | Hypothetical protein. | Hypothetical protein. | 0.861 |
LA_0067 | LA_0153 | LA_0067 | LA_0153 | Hypothetical protein. | Hypothetical protein. | 0.799 |
LA_0067 | LA_0289 | LA_0067 | LA_0289 | Hypothetical protein. | Adenylate/guanylate cyclase. | 0.915 |
LA_0067 | LA_1295 | LA_0067 | LA_1295 | Hypothetical protein. | Hypothetical protein. | 0.808 |
LA_0067 | LA_1745 | LA_0067 | LA_1745 | Hypothetical protein. | Histidine kinase and response regulator hybrid protein. | 0.870 |
LA_0067 | fliE | LA_0067 | LA_0345 | Hypothetical protein. | Flagellar hook-basal body protein FliE. | 0.828 |
LA_0067 | fliF | LA_0067 | LA_2591 | Hypothetical protein. | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.802 |
LA_0067 | fliH | LA_0067 | LA_2589 | Hypothetical protein. | Flagellar assembly protein H. | 0.796 |
LA_0067 | fliL | LA_0067 | LA_3574 | Hypothetical protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.853 |
LA_0067 | fliL-2 | LA_0067 | LA_3575 | Hypothetical protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.836 |
LA_0068 | LA_0067 | LA_0068 | LA_0067 | Hypothetical protein. | Hypothetical protein. | 0.861 |
LA_0153 | LA_0067 | LA_0153 | LA_0067 | Hypothetical protein. | Hypothetical protein. | 0.799 |
LA_0153 | LA_1295 | LA_0153 | LA_1295 | Hypothetical protein. | Hypothetical protein. | 0.770 |
LA_0153 | fliE | LA_0153 | LA_0345 | Hypothetical protein. | Flagellar hook-basal body protein FliE. | 0.493 |
LA_0153 | fliH | LA_0153 | LA_2589 | Hypothetical protein. | Flagellar assembly protein H. | 0.567 |
LA_0153 | fliL | LA_0153 | LA_3574 | Hypothetical protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.690 |
LA_0153 | fliL-2 | LA_0153 | LA_3575 | Hypothetical protein. | Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.639 |
LA_0289 | LA_0067 | LA_0289 | LA_0067 | Adenylate/guanylate cyclase. | Hypothetical protein. | 0.915 |
LA_0289 | LA_1745 | LA_0289 | LA_1745 | Adenylate/guanylate cyclase. | Histidine kinase and response regulator hybrid protein. | 0.998 |
LA_0289 | fliE | LA_0289 | LA_0345 | Adenylate/guanylate cyclase. | Flagellar hook-basal body protein FliE. | 0.812 |
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