Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_0100Hypothetical protein. (424 aa)    
Predicted Functional Partners:
LA_0102
Hypothetical protein.
 
     0.891
LA_3075
LigB-like protein.
  
 
 0.859
LA_3778
LigB-like protein.
  
 
 0.853
LA_3867
Putative lipoprotein.
  
 
   0.789
LA_1046
Hypothetical protein.
 
     0.775
LA_0205
Hypothetical protein.
  
     0.774
LA_1741
Acyltransferase.
  
    0.774
LB_216
Lipoprotein.
  
 
   0.774
LA_2055
MCE-related protein.
  
     0.773
LA_2257
Hypothetical protein.
  
     0.772
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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