Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_0232Glycosyltransferase. (349 aa)    
Predicted Functional Partners:
LA_0231
Glycosyltransferase.
     0.991
LA_0233
Glycosyltransferase.
 
    
0.896
LA_0234
Hypothetical protein.
       0.860
rfbB
dTDP-D-glucose 4,6-dehydratase.
 
  
 0.803
MtfA
Glycosyltransferase.
  
     0.744
LA_2314
Mannosyltransferase.
  
     0.740
LA_4256
Mannosyltransferase.
  
     0.732
wcaJ-3
Glycosyl transferase.
 
  
 0.663
LA_3579
Glycosyltransferase.
  
     0.644
LA_1642
Glycosyltransferase.
  
     0.595
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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