STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LA_0232Glycosyltransferase. (349 aa)    
Predicted Functional Partners:
LA_0231
Glycosyltransferase.
     0.991
LA_0233
Glycosyltransferase.
 
    
0.893
LA_0234
Hypothetical protein.
       0.856
rfbB
dTDP-D-glucose 4,6-dehydratase.
 
  
 0.814
MtfA
Glycosyltransferase.
  
     0.744
LA_2314
Mannosyltransferase.
  
     0.740
LA_4256
Mannosyltransferase.
  
     0.732
LA_1644
Nucleoside-diphosphate-sugar epimerase.
  
  
 0.666
wcaJ-3
Glycosyl transferase.
 
  
 0.657
LA_3579
Glycosyltransferase.
  
     0.644
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.