STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LA_0674Oxidoreductase. (514 aa)    
Predicted Functional Partners:
spsF
CMP-KDO synthetase-related protein.
 
    0.888
LA_0675
Hypothetical protein.
 
   
 0.825
fliE
Flagellar hook-basal body protein FliE.
  
   0.803
LA_1916
Hypothetical protein.
  
 
   0.788
LA_0310
Regulatory-related cAMP-binding protein.
 
  
 0.785
LA_0365
Hypothetical protein.
 
    0.774
LA_2773
Hypothetical protein.
  
     0.768
LA_0301
OmpA family protein.
  
     0.765
LA_1363
Transcriptional regulator.
  
    0.763
LA_0546
Hypothetical protein.
  
  
 0.754
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.