Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pilFTPR-repeat-containing protein. (166 aa)    
Predicted Functional Partners:
pdxA
Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family.
       0.749
LA_0801
Hypothetical protein.
       0.718
LA_0799
Predicted protein involved in cell shape determination.
       0.666
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.546
LA_0060
TPR-repeat-containing protein.
  
     0.514
LA_2267
TPR-repeat-containing protein.
 
     0.485
LA_2803
TPR-repeat-containing protein.
 
     0.484
LA_0465
TPR-repeat-containing protein.
 
     0.478
LA_0798
Hypothetical protein.
       0.476
LA_0138
TPR-repeat-containing protein.
 
     0.447
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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