Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_0965Exodeoxyribonuclease v gamma chain. (1132 aa)    
Predicted Functional Partners:
LA_0966
Exodeoxyribonuclease V beta chain.
 
 
 0.996
LA_0967
Exodeoxyribonuclease v alpha chain.
 
 
 0.987
recQ-2
ATP-dependent DNA helicase RecQ.
     
 0.691
LA_3814
Conserved hypothetical protein.
  
 
 0.684
LA_1861
Hypothetical protein.
  
     0.659
LA_4232
Hypothetical protein.
  
     0.641
LA_2505
Putative esterase/lipase.
  
     0.640
LA_0709
Hypothetical protein.
  
     0.635
LA_3734
Cytoplasmic membrane protein.
  
     0.595
LA_1052
Hypothetical protein.
  
     0.591
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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