Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_1069Hydrolase. (287 aa)    
Predicted Functional Partners:
LB_092
Hypothetical protein.
 
     0.850
LA_1072
Hypothetical protein.
 
     0.757
LA_2824
Hypothetical protein.
  
     0.754
LA_1073
Hypothetical protein.
 
     0.751
LA_4246
Alkaline phosphatase.
  
     0.709
LA_0425
Hypothetical protein.
  
     0.630
mdoC
Glucans biosynthesis protein.
  
     0.589
cyaA-2
Adenylate/guanylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
       0.587
LA_1071
Adenylate/guanylate cyclase.
       0.587
LA_3053
Predicted aminopeptidase.
  
     0.524
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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