Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sunTABC transporter ATP-binding protein. (605 aa)    
Predicted Functional Partners:
mdlB
ATPase and permease components of ABC-type multidrug transport system.
 
 
 
0.779
mdlB-2
ATPase and permease components of ABC-type multidrug transport system.
 
 
 
0.776
mdlB-3
ATPase and permease components of ABC-type multidrug transport system.
 
 
 
0.772
dnaK
DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
     0.650
LA_1118
Hypothetical protein.
  
  
 0.598
LA_2820
Hypothetical protein.
  
  
 0.598
LB_001
Hypothetical protein.
  
  
 0.598
LA_4287
ABC transporter ATP-binding protein.
  
     0.530
LA_1601
FdtA-like protein.
  
  
 0.522
ksgA
Dimethyladenosine transferase.
  
   
 0.520
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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