Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_1997Glycosyltransferase. (726 aa)    
Predicted Functional Partners:
LA_1470
Hypothetical protein.
  
 
 0.861
LA_0138
TPR-repeat-containing protein.
 
 
 0.704
lysU
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.638
LA_1745
Histidine kinase and response regulator hybrid protein.
  
  
 0.631
LA_1996
Hypothetical protein.
       0.630
LA_1998
Polysaccharide deacetylase.
  
  
 0.625
LA_0378
TPR-repeat-containing protein.
 
 
 0.621
LA_0043
TPR-repeat-containing protein.
 
 
 0.618
LA_0289
Adenylate/guanylate cyclase.
  
  
 0.616
LA_0465
TPR-repeat-containing protein.
  
 
 0.578
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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