STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LA_2200Amidase. (186 aa)    
Predicted Functional Partners:
LA_4232
Hypothetical protein.
  
   
 0.720
LA_1404
Hypothetical protein.
      
 0.684
LA_2248
Hypothetical protein.
      
 0.684
LA_3927
TolC family protein.
      
 0.684
dltB
Predicted membrane protein involved in D-alaninealginate export/acetyltransferase of MBOAT family; Belongs to the membrane-bound acyltransferase family.
      
 0.681
LA_3466
Thermolysin.
   
  
 0.538
LA_4161
Thermolysin.
   
  
 0.538
LA_4164
Thermolysin.
   
  
 0.538
LA_1549
Beta-lactamase regulatory protein 1.
  
     0.530
LB_167
Hypothetical protein.
  
    0.463
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.