Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LA_3067 | LA_3068 | TolB-related protein. | Putative lipoprotein. | 0.856 |
LA_3067 | LA_3069 | TolB-related protein. | Hypothetical protein. | 0.847 |
LA_3067 | LA_3070 | TolB-related protein. | Anti-sigma-factor antagonist. | 0.817 |
LA_3067 | LA_3071 | TolB-related protein. | Glycosyltransferase. | 0.549 |
LA_3067 | LA_3072 | TolB-related protein. | Hypothetical protein. | 0.510 |
LA_3068 | LA_3067 | Putative lipoprotein. | TolB-related protein. | 0.856 |
LA_3068 | LA_3069 | Putative lipoprotein. | Hypothetical protein. | 0.846 |
LA_3068 | LA_3070 | Putative lipoprotein. | Anti-sigma-factor antagonist. | 0.817 |
LA_3068 | LA_3071 | Putative lipoprotein. | Glycosyltransferase. | 0.549 |
LA_3068 | LA_3072 | Putative lipoprotein. | Hypothetical protein. | 0.510 |
LA_3069 | LA_3067 | Hypothetical protein. | TolB-related protein. | 0.847 |
LA_3069 | LA_3068 | Hypothetical protein. | Putative lipoprotein. | 0.846 |
LA_3069 | LA_3070 | Hypothetical protein. | Anti-sigma-factor antagonist. | 0.826 |
LA_3069 | LA_3071 | Hypothetical protein. | Glycosyltransferase. | 0.559 |
LA_3069 | LA_3072 | Hypothetical protein. | Hypothetical protein. | 0.518 |
LA_3070 | LA_3067 | Anti-sigma-factor antagonist. | TolB-related protein. | 0.817 |
LA_3070 | LA_3068 | Anti-sigma-factor antagonist. | Putative lipoprotein. | 0.817 |
LA_3070 | LA_3069 | Anti-sigma-factor antagonist. | Hypothetical protein. | 0.826 |
LA_3070 | LA_3071 | Anti-sigma-factor antagonist. | Glycosyltransferase. | 0.540 |
LA_3070 | LA_3072 | Anti-sigma-factor antagonist. | Hypothetical protein. | 0.543 |
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