Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LA_3147Alpha/beta hydrolase superfamily protein. (277 aa)    
Predicted Functional Partners:
LA_3146
Cation transporter protein.
       0.727
LA_3897
Acyltransferase.
  
     0.580
LA_3788
Putative hydrolase.
  
     0.527
LA_3100
Short-chain dehydrogenase.
  
     0.481
LA_3362
Aminoglycoside phosphotransferase.
 
     0.475
LA_2526
Hydrolase.
  
     0.426
caiD-3
enoyl-CoA hydratase.
  
 
  0.424
caiB
acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
  
  0.423
LA_1130
acyl-CoA dehydrogenase.
  
 
  0.415
LA_3205
Zn-dependent hydrolase.
  
     0.413
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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