STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LA_3456Metalloendopeptidase. (397 aa)    
Predicted Functional Partners:
nlpD
M23 family metalloendopeptidase.
  
     0.730
LA_4311
Cytoplasmic membrane protein.
  
     0.717
nlpD-9
M23 family metalloendopeptidase.
  
     0.713
LA_4341
Metalloendopeptidase.
  
     0.700
nlpD-2
M23 family metalloendopeptidase.
  
     0.659
LA_4055
Malate permease.
       0.491
arp-4
Ankyrin repeat-containing protein.
       0.491
nlpD-6
M23 family metalloendopeptidase.
  
     0.472
nlpD-3
M23 family metalloendopeptidase.
  
     0.470
nlpD-4
M23 family metalloendopeptidase.
  
     0.449
Your Current Organism:
Leptospira interrogans
NCBI taxonomy Id: 189518
Other names: L. interrogans serovar Lai str. 56601, Leptospira interrogans serovar Lai str. 56601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.