Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LA_0572 | LA_3535 | TonB-dependent outer membrane receptor. | Hypothetical protein. | 0.594 |
LA_3532 | LA_3533 | Hypothetical protein. | Conserved hypothetical protein. | 0.620 |
LA_3532 | LA_3534 | Hypothetical protein. | Conserved hypothetical protein. | 0.407 |
LA_3532 | LA_3535 | Hypothetical protein. | Hypothetical protein. | 0.475 |
LA_3533 | LA_3532 | Conserved hypothetical protein. | Hypothetical protein. | 0.620 |
LA_3533 | LA_3534 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.720 |
LA_3533 | LA_3535 | Conserved hypothetical protein. | Hypothetical protein. | 0.492 |
LA_3533 | LA_3536 | Conserved hypothetical protein. | Activator of Hsp90 ATPase 1 family protein. | 0.563 |
LA_3534 | LA_3532 | Conserved hypothetical protein. | Hypothetical protein. | 0.407 |
LA_3534 | LA_3533 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.720 |
LA_3534 | LA_3535 | Conserved hypothetical protein. | Hypothetical protein. | 0.760 |
LA_3534 | LA_3536 | Conserved hypothetical protein. | Activator of Hsp90 ATPase 1 family protein. | 0.476 |
LA_3535 | LA_0572 | Hypothetical protein. | TonB-dependent outer membrane receptor. | 0.594 |
LA_3535 | LA_3532 | Hypothetical protein. | Hypothetical protein. | 0.475 |
LA_3535 | LA_3533 | Hypothetical protein. | Conserved hypothetical protein. | 0.492 |
LA_3535 | LA_3534 | Hypothetical protein. | Conserved hypothetical protein. | 0.760 |
LA_3535 | LA_3536 | Hypothetical protein. | Activator of Hsp90 ATPase 1 family protein. | 0.554 |
LA_3536 | LA_3533 | Activator of Hsp90 ATPase 1 family protein. | Conserved hypothetical protein. | 0.563 |
LA_3536 | LA_3534 | Activator of Hsp90 ATPase 1 family protein. | Conserved hypothetical protein. | 0.476 |
LA_3536 | LA_3535 | Activator of Hsp90 ATPase 1 family protein. | Hypothetical protein. | 0.554 |