Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LA_3938 | LA_3940 | LA_3938 | LA_3940 | Hypothetical protein. | Hypothetical protein. | 0.617 |
LA_3938 | LA_3941 | LA_3938 | LA_3941 | Hypothetical protein. | Phosphoesterase. | 0.442 |
LA_3938 | LA_3943 | LA_3938 | LA_3943 | Hypothetical protein. | Hypothetical protein. | 0.442 |
LA_3938 | LA_3944 | LA_3938 | LA_3944 | Hypothetical protein. | Hypothetical protein. | 0.442 |
LA_3938 | gpsA-2 | LA_3938 | LA_3939 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.856 |
LA_3938 | recG | LA_3938 | LA_3945 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.411 |
LA_3940 | LA_3938 | LA_3940 | LA_3938 | Hypothetical protein. | Hypothetical protein. | 0.617 |
LA_3940 | LA_3941 | LA_3940 | LA_3941 | Hypothetical protein. | Phosphoesterase. | 0.738 |
LA_3940 | LA_3943 | LA_3940 | LA_3943 | Hypothetical protein. | Hypothetical protein. | 0.738 |
LA_3940 | LA_3944 | LA_3940 | LA_3944 | Hypothetical protein. | Hypothetical protein. | 0.738 |
LA_3940 | gpsA-2 | LA_3940 | LA_3939 | Hypothetical protein. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.749 |
LA_3940 | recG | LA_3940 | LA_3945 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.738 |
LA_3941 | LA_3938 | LA_3941 | LA_3938 | Phosphoesterase. | Hypothetical protein. | 0.442 |
LA_3941 | LA_3940 | LA_3941 | LA_3940 | Phosphoesterase. | Hypothetical protein. | 0.738 |
LA_3941 | LA_3943 | LA_3941 | LA_3943 | Phosphoesterase. | Hypothetical protein. | 0.856 |
LA_3941 | LA_3944 | LA_3941 | LA_3944 | Phosphoesterase. | Hypothetical protein. | 0.856 |
LA_3941 | gpsA-2 | LA_3941 | LA_3939 | Phosphoesterase. | Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.671 |
LA_3941 | recG | LA_3941 | LA_3945 | Phosphoesterase. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.902 |
LA_3943 | LA_3938 | LA_3943 | LA_3938 | Hypothetical protein. | Hypothetical protein. | 0.442 |
LA_3943 | LA_3940 | LA_3943 | LA_3940 | Hypothetical protein. | Hypothetical protein. | 0.738 |
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