Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GalF | LA_1632 | LB_262 | LA_1632 | UTP-glucose-1-phosphate uridyltransferase. | CDP-glucose 4,6-dehydratase. | 0.807 |
GalF | LA_1634 | LB_262 | LA_1634 | UTP-glucose-1-phosphate uridyltransferase. | UDP-glucose 4-epimerase. | 0.903 |
GalF | LA_3802 | LB_262 | LA_3802 | UTP-glucose-1-phosphate uridyltransferase. | Glucose-1-phosphate thymidylyltransferase. | 0.900 |
GalF | LA_4261 | LB_262 | LA_4261 | UTP-glucose-1-phosphate uridyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase. | 0.903 |
GalF | LB_263 | LB_262 | LB_263 | UTP-glucose-1-phosphate uridyltransferase. | Hypothetical protein. | 0.810 |
GalF | galE | LB_262 | LA_3948 | UTP-glucose-1-phosphate uridyltransferase. | UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.923 |
GalF | gcd1-3 | LB_262 | LA_1631 | UTP-glucose-1-phosphate uridyltransferase. | Nucleotidyl transferase. | 0.910 |
GalF | rfbA | LB_262 | LA_1662 | UTP-glucose-1-phosphate uridyltransferase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.900 |
GalF | ugd | LB_262 | LA_1459 | UTP-glucose-1-phosphate uridyltransferase. | UDP-glucose 6-dehydrogenase. | 0.915 |
GalF | wcaG-3 | LB_262 | LA_1580 | UTP-glucose-1-phosphate uridyltransferase. | Nucleoside-diphosphate-sugar epimerase. | 0.903 |
LA_1632 | GalF | LA_1632 | LB_262 | CDP-glucose 4,6-dehydratase. | UTP-glucose-1-phosphate uridyltransferase. | 0.807 |
LA_1632 | LA_1634 | LA_1632 | LA_1634 | CDP-glucose 4,6-dehydratase. | UDP-glucose 4-epimerase. | 0.887 |
LA_1632 | gcd1-3 | LA_1632 | LA_1631 | CDP-glucose 4,6-dehydratase. | Nucleotidyl transferase. | 0.997 |
LA_1632 | rfbA | LA_1632 | LA_1662 | CDP-glucose 4,6-dehydratase. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.481 |
LA_1632 | ugd | LA_1632 | LA_1459 | CDP-glucose 4,6-dehydratase. | UDP-glucose 6-dehydrogenase. | 0.489 |
LA_1634 | GalF | LA_1634 | LB_262 | UDP-glucose 4-epimerase. | UTP-glucose-1-phosphate uridyltransferase. | 0.903 |
LA_1634 | LA_1632 | LA_1634 | LA_1632 | UDP-glucose 4-epimerase. | CDP-glucose 4,6-dehydratase. | 0.887 |
LA_1634 | gcd1-3 | LA_1634 | LA_1631 | UDP-glucose 4-epimerase. | Nucleotidyl transferase. | 0.920 |
LA_1634 | ugd | LA_1634 | LA_1459 | UDP-glucose 4-epimerase. | UDP-glucose 6-dehydrogenase. | 0.946 |
LA_3802 | GalF | LA_3802 | LB_262 | Glucose-1-phosphate thymidylyltransferase. | UTP-glucose-1-phosphate uridyltransferase. | 0.900 |
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