STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV39708.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
OJV42179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.933
OJV42463.1
Putative baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.880
OJV42462.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.878
OJV42454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.868
OJV42456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.868
OJV42455.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.845
OJV42459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.840
OJV42636.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.694
OJV42640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.694
OJV42641.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.694
Your Current Organism:
Acidobacteriales bacterium 5955
NCBI taxonomy Id: 1895690
Other names: A. bacterium 59-55, Acidobacteriales bacterium 59-55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.