STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV39559.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
OJV39585.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.941
OJV40423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.778
OJV39558.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OJV39557.1
Hypothetical protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.652
BGO25_11960
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.573
OJV39560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
OJV39556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.505
OJV41517.1
Arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.474
OJV41981.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.446
Your Current Organism:
Acidobacteriales bacterium 5955
NCBI taxonomy Id: 1895690
Other names: A. bacterium 59-55, Acidobacteriales bacterium 59-55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.