STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV43238.1Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (371 aa)    
Predicted Functional Partners:
OJV43240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.977
OJV39767.1
Polyprenyl glycosylphosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.945
OJV41114.1
Polyprenyl glycosylphosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.945
OJV43239.1
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.906
OJV43894.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.876
OJV40226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.749
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.732
OJV43237.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.
       0.671
OJV39421.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.651
OJV44490.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.618
Your Current Organism:
Acidobacteriales bacterium 5955
NCBI taxonomy Id: 1895690
Other names: A. bacterium 59-55, Acidobacteriales bacterium 59-55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.