STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV42687.1Pilus assembly protein PilB; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)    
Predicted Functional Partners:
OJV42636.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.988
OJV42641.1
Fimbrial assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.942
OJV41533.1
Type II secretion system protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.924
OJV42640.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.904
OJV42642.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.889
OJV39453.1
Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
OJV42123.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.811
OJV42148.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.768
OJV41532.1
Type II and III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.765
OJV39688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.698
Your Current Organism:
Acidobacteriales bacterium 5955
NCBI taxonomy Id: 1895690
Other names: A. bacterium 59-55, Acidobacteriales bacterium 59-55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.