STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV43989.1Peptidase U62; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)    
Predicted Functional Partners:
OJV44255.1
Peptidase U62; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.833
OJV42152.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
OJV43945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
OJV40370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.659
OJV42964.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OJV41427.1
Outer membrane protein assembly factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
OJV43304.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.548
OJV43990.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.546
OJV39948.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.538
OJV40318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.535
Your Current Organism:
Acidobacteriales bacterium 5955
NCBI taxonomy Id: 1895690
Other names: A. bacterium 59-55, Acidobacteriales bacterium 59-55
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.