STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV28599.1Lactose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
OJV28600.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
OJV25034.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.976
OJV23528.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.971
OJV23756.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
OJV28974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
OJV24040.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
OJV25856.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
OJV25860.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
OJV27659.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.957
OJV29675.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
Your Current Organism:
Actinobacteria bacterium 6920
NCBI taxonomy Id: 1895696
Other names: A. bacterium 69-20, Actinobacteria bacterium 69-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.