STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV30349.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
OJV30350.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.820
OJV30351.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.581
OJV30352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.581
OJV30348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.577
OJV29660.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.513
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
  0.464
OJV23561.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.434
OJV27841.1
Motility protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.414
Your Current Organism:
Actinobacteria bacterium 6920
NCBI taxonomy Id: 1895696
Other names: A. bacterium 69-20, Actinobacteria bacterium 69-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.