STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJU52476.1Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (709 aa)    
Predicted Functional Partners:
OJU52471.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.942
OJU49889.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 
0.895
OJU52477.1
Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.894
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.867
OJU48181.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.859
OJU48537.1
F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.796
OJU47778.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.795
OJU51417.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 
0.754
OJU52469.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.720
BGO03_14045
Protease/lipase ABC transporter permease/ATP-binding protein; Incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.717
Your Current Organism:
Mesorhizobium sp. 6113
NCBI taxonomy Id: 1895780
Other names: M. sp. 61-13, Mesorhizobium sp. 61-13
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