STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJU49280.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
OJU49281.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.922
OJU49279.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.900
OJU49278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.889
OJU49282.1
Flp pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.864
OJU49283.1
CtpF protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.856
OJU51059.1
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.815
BGO03_03920
Pilus assembly protein CpaC; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.794
OJU48663.1
Pilus assembly protein TadD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.780
OJU48685.1
Pilus assembly protein PilA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.779
OJU50364.1
Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.772
Your Current Organism:
Mesorhizobium sp. 6113
NCBI taxonomy Id: 1895780
Other names: M. sp. 61-13, Mesorhizobium sp. 61-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.