STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJV84137.1Succinyl-diaminopimelate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)    
Predicted Functional Partners:
OJV82820.1
Diaminopimelate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.976
OJV83675.1
Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
OJV83677.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.937
OJV84139.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.926
OJV82793.1
N-acetyl-gamma-glutamyl-phosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.868
OJV82790.1
Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.864
OJV83678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.842
OJV82003.1
Glutamine--fructose-6-phosphate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.833
OJV80082.1
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.825
OJV82842.1
4-hydroxy-tetrahydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.818
Your Current Organism:
Microbacterium sp. 7016
NCBI taxonomy Id: 1895785
Other names: M. sp. 70-16, Microbacterium sp. 70-16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.