STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BGO98_00130Hypothetical protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
OJY28751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.696
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
 0.681
OJY30835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.660
OJY16770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.657
OJY30322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.433
OJY16660.1
polyphosphate:AMP phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.426
OJY16994.1
Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.426
OJY18480.1
Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.426
OJY28604.1
Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
   
    0.422
OJY17349.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.406
Your Current Organism:
Myxococcales bacterium 6820
NCBI taxonomy Id: 1895795
Other names: M. bacterium 68-20, Myxococcales bacterium 68-20
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