STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJW10300.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
OJW19928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.700
OJW10299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.561
OJW10301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.491
rpoB
DNA-directed RNA polymerase subunit beta; Metagenomic; derived from metagenome: bioreactor metagenome.
    
  0.465
BGO49_08885
Hypothetical protein; Metagenomic; derived from metagenome: bioreactor metagenome.
    
  0.465
OJW10298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.461
OJW27046.1
Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.410
Your Current Organism:
Planctomycetales bacterium 7110
NCBI taxonomy Id: 1895807
Other names: P. bacterium 71-10, Planctomycetales bacterium 71-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.