STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJW10306.1DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1443 aa)    
Predicted Functional Partners:
OJW13119.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.846
OJW08011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.680
OJW20328.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.670
OJW08012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.670
OJW08007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.659
BGO49_05605
Hypothetical protein; Metagenomic; derived from metagenome: bioreactor metagenome.
  
    0.656
OJW13025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.656
OJW13026.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.656
OJW10307.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.590
OJW10308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
Your Current Organism:
Planctomycetales bacterium 7110
NCBI taxonomy Id: 1895807
Other names: P. bacterium 71-10, Planctomycetales bacterium 71-10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.