STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJW08524.1Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the agmatine deiminase family. (371 aa)    
Predicted Functional Partners:
OJW08523.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OJW09068.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.929
OJW16390.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.904
OJW20232.1
Arginine decarboxylase, pyruvoyl-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.800
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.642
OJW26533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.636
OJW08543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.628
OJW08525.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.628
nadE
NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.553
OJW08526.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.480
Your Current Organism:
Planctomycetales bacterium 7110
NCBI taxonomy Id: 1895807
Other names: P. bacterium 71-10, Planctomycetales bacterium 71-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.