STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJY46979.1Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)    
Predicted Functional Partners:
OJY46978.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.970
OJY46980.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.901
OJY46981.1
4-chlorobenzoate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.884
OJY42902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.875
OJY41920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.872
OJY46952.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.871
OJY41928.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.870
OJY43699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.869
OJY41979.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.869
OJY45346.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.868
Your Current Organism:
Rhizobiales bacterium 6417
NCBI taxonomy Id: 1895814
Other names: R. bacterium 64-17, Rhizobiales bacterium 64-17
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