STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJY58037.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
OJY58035.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.832
OJY58038.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.814
OJY58048.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
OJY57115.1
Cyclic beta 1-2 glucan synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.812
OJY57085.1
Glycosyl transferase family 36; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.812
OJY58039.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
OJY58036.1
Glycosyltransferase WbuB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
OJY58041.1
Family 2 glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.797
OJY58040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.747
OJY58049.1
Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.735
Your Current Organism:
Rhodanobacter sp. 6829
NCBI taxonomy Id: 1895823
Other names: R. sp. 68-29, Rhodanobacter sp. 68-29
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