STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJW11397.1TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)    
Predicted Functional Partners:
OJW09852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.917
OJW11398.1
Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
OJW11562.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.786
OJW11399.1
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OJW11396.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GbsR family.
 
     0.716
OJW09791.1
Lipocalin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the calycin superfamily. Lipocalin family.
      0.680
OJW11097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.659
OJW08901.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.631
OJW10133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.624
OJW11401.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.583
Your Current Organism:
Sphingobacteriales bacterium 3919
NCBI taxonomy Id: 1895834
Other names: S. bacterium 39-19, Sphingobacteriales bacterium 39-19
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