STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDLipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (226 aa)    
Predicted Functional Partners:
OJY57878.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.998
OJY58939.1
Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OJY56463.1
Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.967
OJY55501.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.939
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.934
OJY55500.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.840
OJY55050.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.839
OJY58941.1
DNA internalization-related competence protein ComEC/Rec2; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
OJY58942.1
GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.762
OJY58958.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.644
Your Current Organism:
Thiobacillus sp. 01251
NCBI taxonomy Id: 1895858
Other names: T. sp. 0-1251, Thiobacillus sp. 0-1251
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