STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJX93291.1CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)    
Predicted Functional Partners:
OJX93259.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.987
OJX93888.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.939
OJX97635.1
Plasmid stabilization protein ParE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.939
OJX91003.1
VapC toxin family PIN domain ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.872
OJX95144.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.810
OJX93260.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
OJX93292.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
OJX88683.1
Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.484
OJX89105.1
Glutamate-5-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.475
OJX88678.1
Glutamate 5-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.454
Your Current Organism:
Novosphingobium sp. 63713
NCBI taxonomy Id: 1895900
Other names: N. sp. 63-713, Novosphingobium sp. 63-713
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.